Amber
Description Amber is a suite of biomolecular simulation programs. The term “Amber” refers to two things. First, it is a set of molecular mechanical force fields for the simulation of… Read more »
Category: dove-en
ANTs
AddNoiseToImage CreateTiledMosaic ANTS CreateWarpedGridImage antsAffineInitializer DenoiseImage antsAI DeNrrd antsAlignOrigin ExtractRegionFromImage antsApplyTransforms ExtractRegionFromImageByMask antsApplyTransformsToPoints ExtractSliceFromImage antsASLProcessing.sh FitBSplineToPoints antsAtroposN4.sh etConnectedComponentsFeatureImages antsBOLDNetworkAnalysis.R ImageCompare antsBrainExtraction.sh ImageIntensityStatistics antsCorticalThickness.sh ImageMath ANTSIntegrateVectorField ImageSetStatistics ANTSIntegrateVelocityField iMath antsIntermodalityIntrasubject.sh KellyKapowski… Read more »
apptainer
Appendix
Blender
Batch mode blender -b your_scene.blend -o video_output.avi -s 0 -e 250 -t 16 -a
Boost
ml boost/1.89.0
cmake
ml utils/cmake # alias 4.1.2 versionouml utils/cmake/4.1.1
COMSOL Multiphysics
Description COMSOL Multiphysics is a numerical simulation software based on the Finite Element Method (FEM), used to model and analyze multidisciplinary physical phenomena. It enables the simulation of interactions across… Read more »
CPLEX
Description CPLEX Optimizer provides flexible and high-performance mathematical programming solvers for linear programming, mixed-integer programming, constraint programming, and quadratic constraint programming problems. These solvers include a distributed parallel algorithm for… Read more »